Publications

Lijie Song, Lasse Johan Dyrbye Nielsen, Xinming Xu, Omkar Satyavan Mohite, Matin Nuhamunada, Zhihui Xu, Rob Murphy, Kasun Bodawatta, Michael Poulsen, Mohamed Hatha Abdulla, Eva C Sonnenschein, Tilmann Weber, Ákos T Kovács (2024). Expanding the genome information on Bacillales for biosynthetic gene cluster discovery. Scientific Data.

Caner Bağcı, Matin Nuhamunada, Hemant Goyat, Casimir Ladanyi, Ludek Sehnal, Kai Blin, Satria a Kautsar, Azat Tagirdzhanov, Alexey Gurevich, Shrikant Mantri, Christian Von Mering, Daniel Udwary, Marnix H Medema, Tilmann Weber, Nadine Ziemert (2024). BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes. Nucleic Acid Research.

Tue Sparholt Jørgensen, Omkar S Mohite, Eva B Sterndorff, Maria Alvarez-Arevalo, Kai Blin, Thomas J Booth, Pep Charusanti, David Faurdal, Troels Ø Hansen, Matin Nuhamunada, Anna-Sophie Mourched, Bernhard Ø Palsson, Tilmann Weber (2024). A treasure trove of 1034 actinomycete genomes. Nucleic Acid Research.

Matin Nuhamunada, Omkar S Mohite, Patrick v Phaneuf, Bernhard O Palsson, Tilmann Weber (2024). BGCFlow: systematic pangenome workflow for the analysis of biosynthetic gene clusters across large genomic datasets. Nucleic Acid Research.

Eftychia E Kontou, Axel Walter, Oliver Alka, Julianus Pfeuffer, Timo Sachsenberg, Omkar S Mohite, Matin Nuhamunada, Oliver Kohlbacher, Tilmann Weber (2023). UmetaFlow: an untargeted metabolomics workflow for high-throughput data processing and analysis. Journal of Cheminformatics.

Roberto Sánchez-Navarro, Matin Nuhamunada, Omkar S Mohite, Kenneth Wasmund, Mads Albertsen, Lone Gram, Per H Nielsen, Tilmann Weber, Caitlin M Singleton (2022). Long-read metagenome-assembled genomes improve identification of novel complete biosynthetic gene clusters in a complex microbial activated sludge ecosystem. mSystems.

Muhammad Adnan, Matin Nuhamunada, Lisna Hidayati, Nastiti Wijayanti (2020). In silico vaccine design against dengue virus type 2 envelope glycoprotein. Hayati.

Matin Nuhamunada, Gregorius Altius Pratama, Setianing Wikanthi, Mohamad Khoirul Anam, R Ludhang Pradhipta Rizki, Nastiti Wijayanti (2018). Data Mining and Comparative Analysis of Human Skin Microbiome from EBI Metagenomics Database. The 1st International Conference on Bioinformatics, Biotechnology, and Biomedical Engineering - Bioinformatics and Biomedical Engineering.

Parvez Alam, Danish Otieno, Matin Nuhamunada, Roselyn Anyango, Jared Odoyo, John Odhiambo, Kenneth Onyango (2016). The toughest recorded spider egg case silks are woven into composites with tear-resistant architectures. Materials Science and Engineering: C.

Eko Agus Suyono, Winarto Haryadi, Muhammad Zusron, Matin Nuhamunada, Sri Rahayu, Andhika Puspito Nugroho (2015). The effect of salinity on growth, dry weight and lipid content of the mixed microalgae culture isolated from Glagah as biodiesel substrate. Journal of Life Sciences.